SubtiBank SubtiBank
yhdB
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yhdB

unknown
locus
BSU_09350
pI
4.61
mw
9.66 kDa
protein length
80 aa Sequence Blast
gene length
243 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]

    • Gene

    Coordinates
    1,010,984 1,011,226

    Expression and Regulation

    Operons

    genes
    [gene|9643E3B999C9E273B050302F1ADAF088ECAEB400|yhdB]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]: sigma factor, [pubmed|30782632], in [regulon|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG regulon]
    • regulation
    expressed during [SW|sporulation] ([protein|5F24258282F3166B7696B9E9ABC1706E4D06C944|SigG]) [Pubmed|22383849]
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    additional information

  • the mRNA belongs to the 46 most abundant mRNA species in dormant spores [pubmed|30782632]

    • Biological materials

    Mutant

  • MGNA-A690 (yhdB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/690 NBRP B. subtilis, Japan]
  • BKE09350 ([gene|9643E3B999C9E273B050302F1ADAF088ECAEB400|yhdB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAATCGCTTCTCCTTTC, downstream forward: _UP4_CTCACATAAACAAATCCCGG
  • BKK09350 ([gene|9643E3B999C9E273B050302F1ADAF088ECAEB400|yhdB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09350 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAATCGCTTCTCCTTTC, downstream forward: _UP4_CTCACATAAACAAATCCCGG

    • References

    Research papers

  • 30782632