SubtiBank SubtiBank
yxzE
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yxzE

unknown
locus
BSU_38790
pI
5.10
mw
6.70 kDa
protein length
gene length
201 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • Gene

    Coordinates
    3,982,973 3,983,173

    Expression and Regulation

    Operons

    genes
    [gene|8C8DFC3CE03F8F3EE38376D42DD0D29ACE105A06|yxzE]
    description
    [Pubmed|9987136]

    sigma factors

  • [protein|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW]: sigma factor, [Pubmed|9987136], in [regulon|3D974DD2967C7F8FD4E3C2AF42617B8AE9F0296D|SigW regulon]
  • regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|12076816], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]
  • regulation

  • repressed during logrithmic growth ([protein|search|AbrB]) [Pubmed|12076816]
  • additional information

  • the mRNA is very stable (half-life > 15 min) [http://www.ncbi.nlm.nih.gov/sites/entrez/12884008 PubMed]
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    Biological materials

    Mutant

  • BKE38790 ([gene|8C8DFC3CE03F8F3EE38376D42DD0D29ACE105A06|yxzE]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE38790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTTCGCGTCACTCCCTTT, downstream forward: _UP4_GGCGGCGATTAAACGCCGCC
  • BKK38790 ([gene|8C8DFC3CE03F8F3EE38376D42DD0D29ACE105A06|yxzE]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK38790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACTTCGCGTCACTCCCTTT, downstream forward: _UP4_GGCGGCGATTAAACGCCGCC
  • References

  • 12884008,9987136,12076816