SubtiBank SubtiBank
yjdB
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yjdB

unknown
locus
BSU_11990
pI
10.00
mw
12.25 kDa
protein length
115 aa Sequence Blast
gene length
348 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]
  • Gene

    Coordinates
    1,269,733 1,270,080

    The protein

    [SW|Domains]

  • BIG2 domain (aa 36-114) (according to UniProt)
  • Expression and Regulation

    Operons

    genes
    [gene|890A1723F595FCF252E5E9EA3EE3A73204ADD8C1|yjdB]
    description
    [Pubmed|16291680]

    regulatory mechanism

  • [protein|638D6D2FCCA2A167EFED05CB4E60C2D78D5319AE|PhoP]: activation, [Pubmed|16291680], in [regulon|638D6D2FCCA2A167EFED05CB4E60C2D78D5319AE|PhoP regulon]
  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]
  • regulation

  • expressed under conditions of phosphate limitation ([protein|search|PhoP]) [Pubmed|16291680]
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    Biological materials

    Mutant

  • MGNA-A263 (yjdB::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/263 NBRP B. subtilis, Japan]
  • BKE11990 ([gene|890A1723F595FCF252E5E9EA3EE3A73204ADD8C1|yjdB]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE11990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAAACACTCCTTTA, downstream forward: _UP4_TAATCTTTATCCGCCAGATT
  • BKK11990 ([gene|890A1723F595FCF252E5E9EA3EE3A73204ADD8C1|yjdB]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK11990 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTGAAACACTCCTTTA, downstream forward: _UP4_TAATCTTTATCCGCCAGATT
  • References

  • 16291680,20817675,25666134