SubtiBank SubtiBank
yvgJ [2018-12-07 15:41:15]
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yvgJ [2018-12-07 15:41:15]

lipoteichoic acid synthesis primase
locus
BSU33360
pI
5.31
mw
70.57 kDa
protein length
617 aa Sequence Blast
gene length
1851 bp Sequence Blast
function
biosynthesis of lipoteichoic acid
product
lipoteichoic acid synthesis primase
essential
no
synonyms
yvsF

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.1|Cell wall synthesis] → [category|SW 1.1.1.3|Biosynthesis of lipoteichoic acid]
  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.1|Biosynthesis of cell wall components] → [category|SW 2.6.1.2|Biosynthesis of lipoteichoic acid]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • Gene

    Coordinates
    3,422,354 → 3,424,207

    The protein

    Protein family

  • LTA synthase family (according to Swiss-Prot)
  • Paralogous protein(s)

  • [protein|CCD06F344E3C87E77C3D13883CE2B927F372A84E|YfnI], [protein|2B33F2F9C2FB0767B72A29D060037393C88ACEE5|YqgS], [protein|418900B6DBDF3EF300C930B0C75E31B939F3CE00|LtaS]
  • Structure

  • [PDB|2W5Q] ([protein|418900B6DBDF3EF300C930B0C75E31B939F3CE00|LtaS] from S. aureus, corresponds to aa 215 ... 615 of [protein|880C655DC7149F6EDC21BD2CF8F9F2C9FBEB2CDB|YvgJ]) [pubmed|19168632]
  • [SW|Localization]

  • cell membrane (according to Swiss-Prot)
  • Expression and Regulation

    Operons

    genes
    [gene|880C655DC7149F6EDC21BD2CF8F9F2C9FBEB2CDB|yvgJ]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B065 (yvgJ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1064 NBRP B. subtilis, Japan]
  • BKE33360 (Δ[gene|880C655DC7149F6EDC21BD2CF8F9F2C9FBEB2CDB|yvgJ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33360 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAATATGACTCCTCACG, downstream forward: _UP4_TGAAAAAATCCCTCTATCAA
  • BKK33360 (Δ[gene|880C655DC7149F6EDC21BD2CF8F9F2C9FBEB2CDB|yvgJ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33360 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAATATGACTCCTCACG, downstream forward: _UP4_TGAAAAAATCCCTCTATCAA
  • References

    Reviews

  • 21388439,21255102
  • Original publications

  • 19229300,21255105,23103977,19168632