yvdT

similar to transcriptional regulator ([SW|TetR family])

locus: BSU_34480

pI: 5.30

mw: 22.08 kDa

protein length: 194 aa

gene length: 585 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

Gene

Coordinates: 3,540,822 3,541,406

The protein

Protein family

• [SW|TetR family]

[SW|Domains]

• [SW|HTH tetR-type domain] (aa 6-66) (according to UniProt)

Structure

• [PDB|2F07]

Expression and Regulation

Operons

• genes: [gene|8417C205E756C27D25BCEA9394DEB0968B5F4F7B|yvdT]-[gene|FDE9E1E86BA06B4CE782CBA32F113D302A0B2231|yvdS]-[gene|18CBED273AD7787971073117DFA0B89BDF149B25|yvdR]
  description: [Pubmed|22383849]

• genes: [gene|8417C205E756C27D25BCEA9394DEB0968B5F4F7B|yvdT]
  description: [Pubmed|22383849]

Biological materials

Mutant

• MGNA-B616 (yvdT::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1615 NBRP B. subtilis, Japan]
• BKE34480 ([gene|8417C205E756C27D25BCEA9394DEB0968B5F4F7B|yvdT]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE34480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAGGAACACCTCCAGTA, downstream forward: _UP4_TAAAAAATGACTGGGTAACA
• BKK34480 ([gene|8417C205E756C27D25BCEA9394DEB0968B5F4F7B|yvdT]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK34480 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGAGGAACACCTCCAGTA, downstream forward: _UP4_TAAAAAATGACTGGGTAACA

References

Reviews

• 24006471