ywbF

unknown

locus: BSU_38340

pI: 9.70

mw: 43.85 kDa

protein length: 399 aa

gene length: 1200 bp

function: unknown

product: unknown

essential: no

synonyms: ipa-21r

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 3,934,358 3,935,557

The protein

Protein family

• [SW|major facilitator superfamily] (according to UniProt)

Structure

• [PDB|2V8N] (E. coli lactose permease, corresponds to aa 25 ... 283, 22% identity) [pubmed|17881559]

[SW|Localization]

• cell membrane (according to UniProt)

Expression and Regulation

Operons

• genes: [gene|7EBA1CC70E1E8A73D0E7B3969522633EC42C1C2E|ywbF]-[gene|A63DF11087CEA2D8F5852E6540EFDF0EBCAB96B1|ywbE]
  description: [pubmed|22383849]

  regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

Biological materials

Mutant

• MGNA-B223 (ywbF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1222 NBRP B. subtilis, Japan]
• BKE38340 ([gene|7EBA1CC70E1E8A73D0E7B3969522633EC42C1C2E|ywbF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE38340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAGGGTGCCTCCTTTGG, downstream forward: _UP4_TAATGACTATAATGAACAAA
• BKK38340 ([gene|7EBA1CC70E1E8A73D0E7B3969522633EC42C1C2E|ywbF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK38340 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCAGGGTGCCTCCTTTGG, downstream forward: _UP4_TAATGACTATAATGAACAAA

References

• 220817675,17881559