SubtiBank SubtiBank
yhjP
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

yhjP

similar to [SW|ABC transporter] (peptide binding protein)
locus
BSU_10590
pI
6.12
mw
66.20 kDa
protein length
575 aa Sequence Blast
gene length
1728 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.4|Unknown ABC transporters]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

    • Gene

    Coordinates
    1,133,498 1,135,225

    The protein

    Protein family

  • C-terminal part: [SW|bacterial solute-binding protein 5 family] (according to UniProt)

    • [SW|Domains]

  • [SW|HTH marR-type domain] (aa 1-120) (according to UniProt)

    • Structure

  • [PDB|6TFX] (from Agrobacterium tumefaciens, corresponds to aa 130 ... 564, 23% identity) [pubmed|31922182]

    • Biological materials

    Mutant

  • MGNA-A728 (yhjP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/728 NBRP B. subtilis, Japan]
  • BKE10590 ([gene|61D74BCF9E52A007C596A2C783496EF823FDC2F0|yhjP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE10590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATCCCCGCACCTCCCGAC, downstream forward: _UP4_TAAAAAGAGGGTTCTTTTTT
  • BKK10590 ([gene|61D74BCF9E52A007C596A2C783496EF823FDC2F0|yhjP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK10590 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATCCCCGCACCTCCCGAC, downstream forward: _UP4_TAAAAAGAGGGTTCTTTTTT

    • References

    Research papers

  • 31922182