SubtiBank SubtiBank
ynzC
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ynzC

unknown
locus
BSU_17880
pI
10.28
mw
8.67 kDa
protein length
gene length
234 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]
  • Gene

    Coordinates
    1,919,459 1,919,692

    Phenotypes of a mutant

  • increased sensitivity to DNA-damaging agents [Pubmed|23728628]
  • The protein

    Protein family

  • UPF0291 family (single member, according to UniProt)
  • Structure

  • [PDB|2HEP] (NMR), [PDB|3BHP]
  • [SW|Localization]

  • cytoplasm (according to Swiss-Prot)
  • Expression and Regulation

    Operons

    genes
    [gene|7BF591DCDC9635C605D76135481A8A9DB63EE861|yneA]-[gene|67074435B8FDA85C8ED4D8C4ECE3580C4EDFBF2A|yneB]-[gene|5BFD552F8A467C8D95FABE87CC8C5E7F04114886|ynzC]
    description
    [Pubmed|12581363]

    regulatory mechanism

  • [protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]: repression, [Pubmed|12581363], in [regulon|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA regulon]
  • regulation

  • induced by DNA damage ([protein|D267AF38B0CF107042326E9B8F3DD3C9C85840E4|LexA]) [Pubmed|12581363]
  • additional information

  • YneA is rapidly degraded by extracellular proteases ([protein|5ED8301B9681FDD5171A9344A971E891493A6558|CtpA]) [PubMed|29979679,20400548]
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    Biological materials

    Mutant

  • BKE17880 ([gene|5BFD552F8A467C8D95FABE87CC8C5E7F04114886|ynzC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE17880 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTAAACTCCTTTATTG, downstream forward: _UP4_TAATATAAGAGGAATACGGC
  • BKK17880 ([gene|5BFD552F8A467C8D95FABE87CC8C5E7F04114886|ynzC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK17880 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATGTTAAACTCCTTTATTG, downstream forward: _UP4_TAATATAAGAGGAATACGGC
  • References

  • 12581363,16267290,23728628