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dapB [Mon Aug 31 2015 13:55:16 GMT+0200 (CEST)]
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dapB [Mon Aug 31 2015 13:55:16 GMT+0200 (CEST)]

dihydrodipicolinate reductase (NADPH)
locus
BSU22490
pI
5.06
mw
29.00 kDa
function
biosynthesis of lysine and peptidoglycan
product
dihydrodipicolinate reductase (NADPH)
essential
yes
ec
1.3.1.26
synonyms

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.1|Cell envelope and cell division] → [category|SW 1.1.1|Cell wall synthesis] → [category|SW 1.1.1.1|Biosynthesis of peptidoglycan]
  • [category|SW 2|Metabolism] → [category|SW 2.3|Amino acid/ nitrogen metabolism] → [category|SW 2.3.1|Biosynthesis/ acquisition of amino acids] → [category|SW 2.3.1.6|Biosynthesis/ acquisition of lysine/ threonine]
  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.1|Biosynthesis of cell wall components] → [category|SW 2.6.1.1|Biosynthesis of peptidoglycan]
  • [category|SW 6|Groups of genes] → [category|SW 6.1|Essential genes]
  • [SW|Categories] containing this gene/protein

  • [SW|cell wall synthesis], [SW|biosynthesis/ acquisition of amino acids], [SW|Biosynthesis of cell wall components], [SW|essential genes]
  • This gene is a member of the following [SW|regulons]

  • [SW|Spx regulon]
  • Gene

    Phenotypes of a mutant

  • essential [Pubmed|12682299]
  • The protein

    Catalyzed reaction/ biological activity

  • 2,3,4,5-tetrahydrodipicolinate + NADP+ = 2,3-dihydrodipicolinate + NADPH (according to Swiss-Prot)
  • Protein family

  • glucose-6-phosphate dehydrogenase family (according to Swiss-Prot)
  • [SW|Cofactors]

  • NADP+
  • Structure

  • [PDB|1YL6] (from ''Mycobacterium tuberculosis'', 46% identity, 67% similarity) [Pubmed|20057050]
  • [SW|Interactions]

  • forms tetramers [Pubmed|24261876]
  • Expression and Regulation

    Operon

  • ''[protein|search|ypjD]-[protein|search|dapB]-[protein|search|mgsA]-[SW|bshB1]-[protein|search|bshA]-[protein|search|cca]-[protein|search|birA]'' [Pubmed|20308541]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|23894131]
  • Regulation

  • induced by diamide stess (thiol depletion) ([protein|search|Spx]) [Pubmed|23894131]
  • Regulatory mechanism

  • [protein|search|Spx]: transcription activation [Pubmed|23894131]
  • References

    Operon and expression

  • 20308541,23894131