yrrI [2019-01-04 14:29:25]

membrane protein, similar to coordinator of zonal elongation, may control [category|SW 1.1.1|Cell wall synthesis] by the [category|SW 1.1.1.7|Penicillin-binding proteins]

locus: BSU27420

pI: 8.75

mw: 39.44 kDa

protein length: 353 aa

gene length: 1059 bp

function: may control [SW|cell wall synthesis ]by the [SW|penicillin-binding proteins]

product: similar to coordinator of zonal elongation

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
• [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]

Gene

Coordinates: 2,801,141 → 2,802,202

The protein

Protein family

• UPF0118 (perM) family (according to Swiss-Prot)

Paralogous protein(s)

• [protein|5B769207B05D93FEC36E97BB7074F29BB290C55A|YubA], [protein|42D1A2198CB4C738F5D4C6FA95B1BA24D5620F7E|YueF]

[SW|Localization]

• cell membrane (according to UniProt)

Biological materials

Mutant

• MGNA-A856 (yrrI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/856 NBRP B. subtilis, Japan]
• BKE27420 (Δ[gene|561308269D6A42506DB61EA86ECD1F96E5886920|yrrI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE27420 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTGCTTTCACCTCACCT, downstream forward: _UP4_TGACATCGGCGTGCCGCTTG
• BKK27420 (Δ[gene|561308269D6A42506DB61EA86ECD1F96E5886920|yrrI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK27420 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTGCTTTCACCTCACCT, downstream forward: _UP4_TGACATCGGCGTGCCGCTTG

References

Research papers

• 27941863