SubtiBank SubtiBank
ytcI
You are currently viewing an outdated version of SubtiWiki. Please use the newest version!

ytcI

similar to acetate-CoA ligase
locus
BSU_29560
pI
6.18
mw
59.40 kDa
protein length
529 aa Sequence Blast
gene length
1590 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,023,677 3,025,266

    The protein

    Protein family

  • [SW|ATP-dependent AMP-binding enzyme family] (according to UniProt)

    • Paralogous protein(s)

  • [protein|6671E7D85E99D349679F0E9D825DC035D10FFD2E|AcsA]:

    • Structure

  • [PDB|3ETC] (from Methanosarcina Acetivorans 37% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|48538F67259B25B64A7BC4263E944C7074E8E1B3|ytcI]-[gene|DF51B9E50BD6C87C5FD1A48E15F281FC3A096D0A|ytcJ]
    description
    [Pubmed|22383849]
    view in new tab

    Biological materials

    Mutant

  • MGNA-A107 (ytcI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/107 NBRP B. subtilis, Japan]
  • BKE29560 ([gene|48538F67259B25B64A7BC4263E944C7074E8E1B3|ytcI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE29560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCCTCACTTT, downstream forward: _UP4_GCGTAAAGAAAGAGAGTGAA
  • BKK29560 ([gene|48538F67259B25B64A7BC4263E944C7074E8E1B3|ytcI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK29560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CACGAACAACTCCTCACTTT, downstream forward: _UP4_GCGTAAAGAAAGAGAGTGAA