SubtiBank SubtiBank
ydgA
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ydgA

unknown
locus
BSU_05560
pI
4.17
mw
8.28 kDa
protein length
80 aa Sequence Blast
gene length
243 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]

    • Gene

    Coordinates
    602,185 602,427

    Expression and Regulation

    Operons

    genes
    [gene|68E585F6670539982E8E8032337DA2043C67FCC4|ydgB]-[gene|483587EB658850D786C3C95C02D419994FCC9F45|ydgA]-[gene|8F85E6DE353F29759301A463335BFC15F829E2D0|cotP]
    description
    [Pubmed|22383849]

    sigma factors

  • [protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK]: sigma factor, [Pubmed|15699190], in [regulon|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|SigK regulon]

    • regulatory mechanism

  • [protein|19228BAD44E6DA3DE908DC390FDF628C18D94E65|GerE]: repression, [Pubmed|9068633], in [regulon|19228BAD44E6DA3DE908DC390FDF628C18D94E65|GerE regulon]

    • regulation

  • expressed during sporulation ([protein|6FAD8804AA32B84819DDE57C0AF63F208FB9FFD1|SigKC]) [Pubmed|15699190]
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    Biological materials

    Mutant

  • BKE05560 ([gene|483587EB658850D786C3C95C02D419994FCC9F45|ydgA]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTGATATGGCATAGACGAAA, downstream forward: _UP4_AATCAAATTTAAGGAGAATC
  • BKK05560 ([gene|483587EB658850D786C3C95C02D419994FCC9F45|ydgA]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_TTGATATGGCATAGACGAAA, downstream forward: _UP4_AATCAAATTTAAGGAGAATC

    • References

  • 15699190,9068633,11150673,21926231