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rapD [Tue Dec 13 2016 11:16:36 GMT+0100 (CET)]
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rapD [Tue Dec 13 2016 11:16:36 GMT+0100 (CET)]

response regulator aspartate phosphatase, controls ComA activity
locus
BSU36380
pI
7.69
mw
41.00 kDa
function
control of ComA-dependent gene expression
product
response regulator aspartate phosphatase
essential
no
synonyms
ywpA

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.7|Genetic competence]
  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.4|Protein modification] → [category|SW 3.3.4.4|Protein phosphatases]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.2|Control of two-component response regulators] → [category|SW 3.4.2.2.2|Response regulator aspartate phosphatase]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.8|Quorum sensing]
  • [category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.3|Genetic competence]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.2|Cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • [SW|Categories] containing this gene/protein

  • [SW|genetic competence], [SW|protein modification], [SW|transcription factors and their control], [SW|quorum sensing], [SW|cell envelope stress proteins (controlled by SigM, V, W, X, Y)]
  • This gene is a member of the following [SW|regulons]

  • [SW|RghR regulon], [SW|SigM regulon], [SW|SigX regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    3,744,349 -> 3,745,413

    The protein

    Catalyzed reaction/ biological activity

  • control of [protein|search|ComA]-dependent gene expression [Pubmed|17227471]
  • Protein family

  • RAP family (according to Swiss-Prot)
  • Expression and Regulation

    Operon

  • ''[protein|search|rapD]'' [Pubmed|9636707]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|9636707], [protein|search|SigM] [Pubmed|18179421], [protein|search|SigX] [Pubmed|9636707]
  • Regulation

  • repressed by [protein|search|RghR] [Pubmed|17227471]
  • Regulatory mechanism

  • [protein|search|RghR]: transcription repression [Pubmed|17227471]
  • References

  • 17227471,9636707,18179421