xpf

PBSX phage RNA polymerase sigma factor

locus: BSU_12560

pI: 8.08

mw: 19.95 kDa

protein length: 169 aa

gene length: 510 bp

function: transcription of PBSX prophage genes

product: PBSX prophage RNA polymerase sigma factor

essential: no

synonyms: pcf, ykxE

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.2|RNA synthesis and degradation] → [category|SW 3.2.1|Transcription] → [category|SW 3.2.1.2|Sigma factors]
• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.1|Sigma factors and their control] → [category|SW 3.4.1.1|Sigma factors]
• [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.1|PBSX prophage]

Gene

Coordinates: 1,324,471 1,324,980

Biological materials

Mutant

• BKE12560 ([gene|458406A4E6824C24493CFC19718F10720AA3B453|xpf]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE12560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTATGATCCTCCTCAT, downstream forward: _UP4_TGAAAGCTTGTCATACGTTT
• BKK12560 ([gene|458406A4E6824C24493CFC19718F10720AA3B453|xpf]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK12560 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTATGATCCTCCTCAT, downstream forward: _UP4_TGAAAGCTTGTCATACGTTT

References

• 8083174