SubtiBank SubtiBank
fabG
An ordered knock out library of all non-essential genes in B. subtilis is now available at Addgene. Information on ordering a copy can be found here. See Koo et al. 2017 for details about library construction.

fabG

beta-ketoacyl-acyl carrier protein reductase
locus
BSU15910
pI
8.09
mw
26.13 kDa
protein length
246 aa Sequence Blast
gene length
738 bp Sequence Blast
function
fatty acid biosynthesis
product
beta-ketoacyl-acyl carrier protein reductase
essential
yes
ec
1.1.1.100
synonyms
ylpF

Genomic Context

      

categories

  • [category|SW 2|Metabolism] → [category|SW 2.4|Lipid metabolism] → [category|SW 2.4.2|Biosynthesis of lipids] → [category|SW 2.4.2.1|Biosynthesis of fatty acids]
  • [category|SW 6|Groups of genes] → [category|SW 6.1|Essential genes]
  • Gene

    Coordinates
    1,664,513 → 1,665,253

    Phenotypes of a mutant

  • essential [Pubmed|12682299]
  • The protein

    Catalyzed reaction/ biological activity

  • (3R)-3-hydroxyacyl-[acyl-carrier-protein] + NADP+ = 3-oxoacyl-[acyl-carrier-protein] + NADPH (according to Swiss-Prot)
  • Protein family

  • short-chain dehydrogenases/reductases (SDR) family (according to Swiss-Prot)
  • Paralogous protein(s)

  • [protein|652A1CC7F6D33E2C9032E557FAF34B5A828CD441|YusS], [protein|B6FF689E65906186F3576B378650D713DB84EDDA|YcdF], [protein|3161519994609DA9360ED6E073E4A4C8C6210EFB|YdaD], [protein|3BF3EC6B3139744D968B2FF18CBEEEF15B591AFF|YtkK], [protein|248F0805272FED9B38ECBB31E2872BC9EC163CE0|YmfI], [protein|6BA346D8A7B496F9618AFAB4FEEF4BD1A41D2C7E|YoxD], [protein|EAEEA4DD9641919830A81185333A2610B964D37C|YhdF], [protein|6047F2493FCE3D2A9BDB1AD88E5926ECEED81036|YhxC], [protein|739B228743BC1FE9E6888E999BC0E4F615E36F9E|YhxD], [protein|4DEFC2998464BF8327578C36A13A10DD277F991E|YkvO]
  • Structure

  • [PDB|2UVD] (the enzyme from ''B. anthracis'', 73% identity) [pubmed|17894349]
  • Expression and Regulation

    Operons

    genes
    [gene|FCDE900167AE36377979E0CF7BC33C7F351B95D3|fapR]-[gene|8F5612395EBF90BEF4C80056EECAFC572384E7F8|plsX]-[gene|BB8542A6444564B21FF5DB6E2C75192C6DA2DFB8|fabD]-[gene|439B468A13137000FB42E9389391CB4986FFED84|fabG]-[gene|8D260693D0C69442BCB9F3D8480E8425ACFE34D2|acpA]
    description
    [Pubmed|19850612]

    sigma factors

  • [protein|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA]: sigma factor, [Pubmed|16932747], in [regulon|360F48D576DE950DF79C1A2677B7A35A8D8CC30C|SigA regulon]
  • regulatory mechanism

  • [protein|FCDE900167AE36377979E0CF7BC33C7F351B95D3|FapR]: repression, [Pubmed|12737802], in [regulon|FCDE900167AE36377979E0CF7BC33C7F351B95D3|FapR regulon]
  • [protein|7832489F11F606BCF637EC23BAAB41AD10237EBB|ComA]: activation, ([protein|7832489F11F606BCF637EC23BAAB41AD10237EBB|ComA]) [Pubmed|16091051], in [regulon|7832489F11F606BCF637EC23BAAB41AD10237EBB|ComA regulon]
  • regulation

  • ''[protein|FCDE900167AE36377979E0CF7BC33C7F351B95D3|FapR]'': repressed in the absence of malonyl-CoA or malonyl-[protein|8D260693D0C69442BCB9F3D8480E8425ACFE34D2|ACP] ([protein|FCDE900167AE36377979E0CF7BC33C7F351B95D3|FapR]) [Pubmed|12737802]
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    additional information

  • the mRNA is cleaved by [protein|BAB297D18F94FFA67B8D12A684AB4D1BCDFB4981|RNase III] [PubMed|26883633]
  • References

    Reviews

  • 15952903,17919287
  • Original Publications

  • 12737802,16932747,19850612,11669613,16091051,26883633,17894349