SubtiBank SubtiBank
yugF [2019-08-27 09:39:31]
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yugF [2019-08-27 09:39:31]

similar to dihydrolipoamide S-acetyltransferase
locus
BSU_31420
pI
8.36
mw
31.18 kDa
protein length
273 aa Sequence Blast
gene length
822 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]
  • [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

    • Gene

    Coordinates
    3,227,581 3,228,402

    The protein

    Protein family

  • dmpD/todF/xylF esterase family (single member, according to UniProt)

    • Structure

  • [PDB|5JZ9] (26% identity) [pubmed|28380256]

    • Expression and Regulation

    Operons

    genes
    [gene|3EE40BA7FB4951A72964F847B6A678B48579D191|yugF]
    description
    [Pubmed|9274030]

    regulation

  • expressed during [category|SW 4.2|Sporulation] [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-B550 (yugF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1549 NBRP B. subtilis, Japan]
  • BKE31420 ([gene|3EE40BA7FB4951A72964F847B6A678B48579D191|yugF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE31420 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGTGTCACTCCCTTT, downstream forward: _UP4_TAACAAAAAAACCGGTGCTG
  • BKK31420 ([gene|3EE40BA7FB4951A72964F847B6A678B48579D191|yugF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK31420 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCTGTGTCACTCCCTTT, downstream forward: _UP4_TAACAAAAAAACCGGTGCTG

    • References

  • 9274030,28380256