ydhK

general stress protein, survival of ethanol and paraquat stresses

locus: BSU_05790

pI: 7.41

mw: 22.39 kDa

protein length: 205 aa

gene length: 618 bp

function: survival of stress conditions

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.1|General stress proteins (controlled by SigB)]
• [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.8|Resistance against oxidative and electrophile stress]

Gene

Coordinates: 624,492 625,109

The protein

Structure

• [PDB|4MDW]
• [PDB|2KY9]

Expression and Regulation

Operons

• genes: [gene|3A0BC04A1A61ABA747838CAF5FD513D9ABE23201|ydhK]
  description: [pubmed|22383849]

  sigma factors

  • [protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]: sigma factor, [Pubmed|15805528,10482513], in [regulon|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB regulon]

  regulation

  • induced by stress ([protein|580011DE5DC40EC9E7E0512791D328FAA010DCB8|SigB]) [Pubmed|15805528,10482513]

Biological materials

Mutant

• MGNA-C186 (ydhK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2184 NBRP B. subtilis, Japan]
• BKE05790 ([gene|3A0BC04A1A61ABA747838CAF5FD513D9ABE23201|ydhK]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGAAAACATGCCCTCTC, downstream forward: _UP4_GCTAAATAATAAAAAATCCT
• BKK05790 ([gene|3A0BC04A1A61ABA747838CAF5FD513D9ABE23201|ydhK]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05790 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATGAAAACATGCCCTCTC, downstream forward: _UP4_GCTAAATAATAAAAAATCCT

References

• 15805528,10482513,22582280