SubtiBank SubtiBank
spoIVCA [2017-8-11 16:0:3]
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spoIVCA [2017-8-11 16:0:3]

site-specific DNA recombinase required for creating the sigK gene (excision of the skin element)
locus
BSU25770
pI
9.50
mw
57.31 kDa
protein length
500 aa Sequence Blast
gene length
1500 bp Sequence Blast
function
excision of the skin element, creation of the sigK gene
product
site-specific DNA recombinase
essential
no
synonyms
cisA

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination] → [category|SW 3.1.5.1|Excision of prophages]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.1|Sigma factors and their control] → [category|SW 3.4.1.2|Control of sigma factors]
  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.4|Sporulation proteins/ other]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.3|Skin element]
  • Gene

    Coordinates
    2,653,371 → 2,654,873

    Expression and Regulation

    Operons

    genes
    [gene|318618D2FB485EA2A08AD8468B1144ACC1CA2B99|spoIVCA]
    description
    [Pubmed|2105293]

    sigma factors

  • [protein|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE]: sigma factor, [Pubmed|15699190,2105293], in [regulon|3CB24D493B3282278B7DC61CE3C793DFA815F9E2|SigE regulon]
  • regulatory mechanism

  • [protein|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|SpoIIID]: activation, [Pubmed|7966271], in [regulon|90DCE4F286D2C151D8BDBF0E024E6BBEC94E2397|SpoIIID regulon]
  • regulation

  • expressed early during sporulation in the mother cell ([protein|search|SigE], [SW|SpoIIID]) [Pubmed|15699190,2105293,7966271]
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    References

  • 2163341,2105293,2841290,7966271