SubtiBank SubtiBank
yxaD
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yxaD

similar to transcriptional regulator ([SW|MarR family])
locus
BSU_40010
pI
6.76
mw
16.70 kDa
protein length
143 aa Sequence Blast
gene length
432 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    4,109,185 4,109,616

    The protein

    Protein family

  • [SW|MarR family]

    • [SW|Domains]

  • [SW|HTH marR-type domain] (aa 11-139) (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|30E52226538965F2AF1EC34F5E4A14CA8B4CDE26|yxaD]
    description
    [Pubmed|10746760]
    view in new tab

    Biological materials

    Mutant

  • MGNA-B761 (yxaD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1760 NBRP B. subtilis, Japan]
  • BKE40010 ([gene|30E52226538965F2AF1EC34F5E4A14CA8B4CDE26|yxaD]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40010 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATCGCTCTCGCTCCCTAT, downstream forward: _UP4_TAACAGCTGAAAAACCCATG
  • BKK40010 ([gene|30E52226538965F2AF1EC34F5E4A14CA8B4CDE26|yxaD]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40010 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAATCGCTCTCGCTCCCTAT, downstream forward: _UP4_TAACAGCTGAAAAACCCATG

    • References

  • 16479537,10746760