SubtiBank SubtiBank
ripX [Tue Dec 13 2016 11:16:34 GMT+0100 (CET)]
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ripX [Tue Dec 13 2016 11:16:34 GMT+0100 (CET)]

site-specific integrase/recombinase, partitioning of the terminus region after replication
locus
BSU23510
pI
10.00
mw
33.00 kDa
function
chromosome partitioning
product
site-specific integrase/recombinase
essential
no
synonyms
ykqM
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.3|DNA condensation/ segregation]

    • [SW|Categories] containing this gene/protein

  • [SW|DNA condensation/ segregation]

    • Gene

    Coordinates on the chromosome (coding sequence)
    2,448,591 -> 2,449,481

    The protein

    Catalyzed reaction/ biological activity

  • resolution of chromosome dimers by site specific recombination at the dif site (located close to the terminus region on the chromosome)

    • Protein family

  • XerD subfamily (according to Swiss-Prot)

    • Paralogous protein(s)

  • [protein|search|CodV]

    • Structure

  • [PDB|1A0P] (from ''E. coli'', 44% identity, complex with [SW|CodV]) [Pubmed|9311978]

    • [SW|Localization]

  • cytoplasm (according to Swiss-Prot)
  • assembles on the chromosome at the dif site throughout the cell cycle [Pubmed|21239579]

    • Biological materials

    Mutant

  • 1A793 ( ''ripX''::''spec''), [Pubmed| ], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A793&Search=1A793 BGSC]
  • 1A796 ( ''ripX''::''spec''), [Pubmed|11208805], available at [http://pasture.asc.ohio-state.edu/BGSC/getdetail.cfm?bgscid=1A796&Search=1A796 BGSC]

    • References

    Reviews

  • 23400100

    • Original publications

  • 10498718,16597952,11208805,21239579,11134515,9311978