yheN

putative polysaccharide deacetylase

locus: BSU_09660

pI: 8.61

mw: 31.58 kDa

protein length: 282 aa

gene length: 849 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.6|Poorly characterized/ putative enzymes]

Gene

Coordinates: 1,040,861 1,041,709

The protein

Protein family

• [SW|polysaccharide deacetylase family] (according to UniProt)

Paralogous protein(s)

• [protein|603E226CE488A25C4E28A6A7363CCD65BE64BB21|PdaC]:

[SW|Domains]

• NodB homology domain (aa 85-271) (according to UniProt)

Structure

• [PDB|2C1G] (the NodB domain, from Streptococcus pneumoniae, 37% identity) [pubmed|16221761]

Expression and Regulation

Operons

• genes: [gene|2E2D21BEA164C7EB93B6A3F3C990ABD475920A81|yheN]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-A708 (yheN::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/708 NBRP B. subtilis, Japan]
• BKE09660 ([gene|2E2D21BEA164C7EB93B6A3F3C990ABD475920A81|yheN]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE09660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAACAATCTCTCCATTGG, downstream forward: _UP4_TAAAAAAGTGAGGCGCATAA
• BKK09660 ([gene|2E2D21BEA164C7EB93B6A3F3C990ABD475920A81|yheN]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK09660 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATAACAATCTCTCCATTGG, downstream forward: _UP4_TAAAAAAGTGAGGCGCATAA

References

Research papers

• 16221761