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ytcQ
polygalacturonan and rhamnogalacturonan [SW|ABC transporter] (solute-binding lipoprotein)
function
uptake of polygalacturonan and rhamnogalacturonan
product
polygalacturonan and rhamnogalacturonan [SW|ABC transporter] (solute-binding lipoprotein)
Genomic Context
categories
[category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.1|Importers] → [category|SW 1.2.1.1.1|Uptake of carbon sources][category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.26|Utilization of pectin][category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]Gene
Coordinates
3,085,800 3,087,296
The protein
Protein family
[SW|Bacterial solute-binding protein 1 family] (according to UniProt)Paralogous protein(s)
[protein|A4DA5C00BA37FF65E4190EC95B183ABAF1C9364D|LplA] [SW|Localization]
associated to the membrane (via [protein|87B212C8C61483DF2874762A3B77111616C616A5|YtcP]-[protein|4ED1DD17694A06CFDFF48943BAE8AEC2CCCB0401|YteP]) [Pubmed|10092453]Expression and Regulation
Operons
genes
[gene|87B212C8C61483DF2874762A3B77111616C616A5|ytcP]-[gene|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|ytcQ]
description
[Pubmed|22383849]
view in new tabBiological materials
Mutant
MGNA-A806 (ytcQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/806 NBRP B. subtilis, Japan]BKE30160 ([gene|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|ytcQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE30160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTACCCCTCCGTTTCA, downstream forward: _UP4_TAACATTGGAAAAACCCAAABKK30160 ([gene|2D46E89AF6157B49BD443F47DB4A7258F22E8A24|ytcQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK30160 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCGTACCCCTCCGTTTCA, downstream forward: _UP4_TAACATTGGAAAAACCCAAAReferences
10092453,22383849,29240795