yerI

unknown

locus: BSU_06640

pI: 4.87

mw: 39.18 kDa

protein length: 336 aa

gene length: 1011 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 6|Groups of genes] → [category|SW 6.7|Proteins of unknown function]

Gene

Coordinates: 724,987 725,997

The protein

Protein family

• pseudomonas-type thrB family (single member, according to UniProt)

Structure

• [PDB|6EF6] (from Mycobacterium smegmatis, corresponds to aa 17 ... 286, 25% identity) [pubmed|30361441]

Expression and Regulation

Operons

• genes: [gene|2AF5F4142F3459A651FCB4057D6B92B9C1D76C6D|yerI]
  description: [pubmed|22383849]

  regulatory mechanism

  • [protein|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB]: repression, [Pubmed|20817675], in [regulon|E5110D9C36E8C55AFD1419987B14A53232165F20|AbrB regulon]

Biological materials

Mutant

• MGNA-A927 (yerI::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/927 NBRP B. subtilis, Japan]
• BKE06640 ([gene|2AF5F4142F3459A651FCB4057D6B92B9C1D76C6D|yerI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE06640 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTTTCATTGCTATAGA, downstream forward: _UP4_TAGATAGAAAAAGCCAATGG
• BKK06640 ([gene|2AF5F4142F3459A651FCB4057D6B92B9C1D76C6D|yerI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK06640 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCCTTTCATTGCTATAGA, downstream forward: _UP4_TAGATAGAAAAAGCCAATGG

References

• 20817675,30361441