ydeQ

similar to NAD(P)H oxidoreductase

locus: BSU_05300

pI: 6.06

mw: 22.69 kDa

protein length: 197 aa

gene length: 594 bp

function: unknown

product: unknown

essential: no

synonyms

Genomic Context

categories

• [category|SW 2|Metabolism] → [category|SW 2.1|Electron transport and ATP synthesis] → [category|SW 2.1.4|Electron transport/ other/ based on similarity]

Gene

Coordinates: 576,209 576,802

The protein

Protein family

• NAD(P)H dehydrogenase (quinone) family (with [protein|E8048E181756BCE307CF28CF31664421404748A4|YwrO] and [protein|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|YrkL], according to UniProt)

Paralogous protein(s)

• [protein|2EA9792C1C7CD89E43742F57FFB7300725B6AEF4|YrkL], [protein|E8048E181756BCE307CF28CF31664421404748A4|YwrO]

[SW|Cofactors]

• FMN or FAD [Pubmed|21635694]

Structure

• [PDB|5LVA] (from Streptomyces violaceus, 55% identity) [pubmed|27714222]

Expression and Regulation

Operons

• genes: [gene|2782BD764716CF5FAD0988284310CF75508F2286|ydeQ]
  description: [pubmed|22383849]

Biological materials

Mutant

• MGNA-C138 (ydeQ::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2136 NBRP B. subtilis, Japan]
• BKE05300 ([gene|2782BD764716CF5FAD0988284310CF75508F2286|ydeQ]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE05300 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCCTTTCATTCCTTAGA, downstream forward: _UP4_TAAAGATTGATTTTTGAAAA
• BKK05300 ([gene|2782BD764716CF5FAD0988284310CF75508F2286|ydeQ]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK05300 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTCCTTTCATTCCTTAGA, downstream forward: _UP4_TAAAGATTGATTTTTGAAAA

References

Research papers

• 27714222