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rapA [Sat Apr 30 2016 19:30:49 GMT+0200 (CEST)]
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rapA [Sat Apr 30 2016 19:30:49 GMT+0200 (CEST)]

response regulator aspartate phosphatase, dephosphorylates Spo0F-P, control of the phosphorelay
locus
BSU12430
pI
4.00
mw
44.00 kDa
function
control of sporulation initiation
product
response regulator aspartate phosphatase
essential
no
synonyms
gsiAA, spo0L

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.4|Protein modification] → [category|SW 3.3.4.4|Protein phosphatases]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.2|Control of two-component response regulators] → [category|SW 3.4.2.2.2|Response regulator aspartate phosphatase]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.7|phosphorelay] → [category|SW 3.4.7.5|Phosphatases controlling the phosphorelay]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.8|Quorum sensing]
  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.2|phosphorelay] → [category|SW 4.2.2.5|Phosphatases controlling the phosphorelay]
  • [SW|Categories] containing this gene/protein

  • [SW|protein modification], [SW|transcription factors and their control], [SW|phosphorelay], [SW|quorum sensing]
  • This gene is a member of the following [SW|regulons]

  • [SW|CodY regulon], [SW|ComA regulon], [SW|Spo0A regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    1,315,869 -> 1,317,005

    The protein

    Protein family

  • RAP family (according to Swiss-Prot)
  • [SW|Domains]

  • modular organization comprising an amino terminal alpha-helical domain connected to a domain formed by six tetratricopeptide (TPR) repeats [Pubmed|11923303,22267516]
  • [SW|Interactions]

  • [protein|search|RapA] (central TPR3-5 repeats) -[protein|search|PhrA] [Pubmed|11923303,22267516]
  • [protein|search|RapA] (N-terminal 60 amino acids) -[SW|Spo0F] [Pubmed|11923303,22267516]
  • Expression and Regulation

    Operon

  • ''[protein|search|rapA]-[protein|search|phrA]'' [Pubmed|1378051]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|1378051]
  • Regulation

  • repressed by glucose (4.2-fold) ([protein|search|CcpA]) [Pubmed|12850135]
  • repressed by casamino acids [Pubmed|12107147]
  • repressed under conditions that trigger sporulation ([SW|Spo0A]) [Pubmed|14651647]
  • repressed during growth in the presence of branched chain amino acids ([protein|search|CodY]) [Pubmed|12618455]
  • expressed at high cell density ([protein|search|ComA]) [Pubmed|16091051]
  • Regulatory mechanism

  • [protein|search|ComA]: transcription activation ([protein|search|ComA]) [Pubmed|16091051]
  • [protein|search|CcpA]: transcription repression [Pubmed|12850135]
  • [SW|Spo0A]: transcription repression [Pubmed|14651647]
  • [protein|search|CodY]: transcription repression [Pubmed|23569278,12618455]
  • References

  • 8643670,8730857,11923303,22267516,14651647,12618455,12107147,19380751,12850135,1378051,16091051,23569278,26582911