yesX [Tue Dec 13 2016 11:16:31 GMT+0100 (CET)]

rhamnogalacturonanlyase, degrades oligo- to disaccharides

locus: BSU07060

pI: 5.22

mw: 67.00 kDa

function: utilization of rhamnogalacturonan

product: rhamnogalacturonan lyase, degrades oligo- to disaccharides

essential: no

synonyms

Genomic Context

categories

• [category|SW 2|Metabolism] → [category|SW 2.2|Carbon metabolism] → [category|SW 2.2.2|Utilization of specific carbon sources] → [category|SW 2.2.2.26|Utilization of pectin]

[SW|Categories] containing this gene/protein

• [SW|utilization of specific carbon sources]

This gene is a member of the following [SW|regulons]

• [SW|YesS regulon]

Gene

Coordinates on the chromosome (coding sequence): 772,142 -> 773,980

The protein

Protein family

• polysaccharide lyase 11 family (according to Swiss-Prot)

Paralogous protein(s)

• [protein|search|YesW]

Structure

• [PDB|2ZUY]

[SW|Localization]

• secreted (according to Swiss-Prot)

Expression and Regulation

Operon

• ''[protein|search|rhgR]-[protein|search|yesT]-[protein|search|yesU]-[protein|search|yesV]-[protein|search|yesW]-[protein|search|yesX]-[protein|search|yesY]-[protein|search|yesZ]'' [Pubmed|19651770]

Regulation

• induced by pectin ([protein|search|RhgR]) [Pubmed|19651770]

Regulatory mechanism

• [protein|search|RhgR]: transcriptional activation [Pubmed|19651770]

References

• 19651770,17449691,19193638