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ssbB [Tue Dec 13 2016 11:16:36 GMT+0100 (CET)]
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ssbB [Tue Dec 13 2016 11:16:36 GMT+0100 (CET)]

single-strand DNA-binding proteinrequired to internalize and to recombine ssDNA with homologous resident duplex
locus
BSU36310
pI
6.00
mw
12.00 kDa
function
required for efficient genetic transformation
product
single-strand DNA-binding protein
essential
no
synonyms
ywpH

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.1|DNA replication]
  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination]
  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination] → [category|SW 3.1.5.6|Other proteins]
  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.7|Genetic competence]
  • [category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.3|Genetic competence]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.1|Phosphorylation on an Arg residue]
  • [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.7|Phosphorylation on a Tyr residue]
  • [SW|Categories] containing this gene/protein

  • [SW|DNA replication], [SW|genetic competence], [SW|DNA repair/ recombination], [SW|phosphoproteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|ComK regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    3,740,206 -> 3,740,547

    The protein

    Catalyzed reaction/ biological activity

  • binds and protects internalized foreign ssDNA [Pubmed|22373918]
  • RecA-ATP in concert with [protein|search|DprA] and [protein|search|SsbA] catalyzes DNA strand exchange, with [protein|search|SsbB] as an accessory factor [Pubmed|25138221]
  • Paralogous protein(s)

  • [protein|search|SsbA]
  • Modification

  • phosphorylated on Arg-55 [Pubmed|22517742]
  • phosphorylated on Tyr by [protein|search|PtkA], dephosphorylated by [protein|search|PtpZ] [Pubmed|16549871]
  • Effectors of protein activity

  • phosphorylation strongly increases DNA-binding activity [Pubmed|16549871]
  • Structure

  • [PDB|3VDY] (in complex with ssDNA) [Pubmed|22373918]
  • [SW|Localization]

  • localizes to cell poles in competent cells [Pubmed|16009133]
  • localizes to the DNA entry pole during transformation [Pubmed|22373918]
  • transiently localizes to the cell pole, and co-localizes with the DNA uptake machinery [Pubmed|17630974]
  • [SW|Interactions]

  • forms tetramers [Pubmed|22373918]
  • [protein|search|SsbB]-[SW|ComFA] [Pubmed|17630974]
  • [protein|search|SsbB]-[protein|search|CoiA] [Pubmed|17630974]
  • [protein|search|SsbB]-[protein|search|DprA] [Pubmed|17630974]
  • [protein|search|SsbB]-[protein|search|RecA] [Pubmed|17630974]
  • Expression and Regulation

    Operon

  • ''[protein|search|ssbB]'' [Pubmed|22383849]
  • ''[protein|search|ssbB]-[protein|search|glcR]'' [Pubmed|14762004] (this is unlikely according to [Pubmed|22383849])
  • Regulation

  • expressed at the onset of stationary phase [Pubmed|14762004]
  • Regulatory mechanism

  • [protein|search|ComK]: transcription activation [Pubmed|11948146]
  • Biological materials

    Expression vector

  • for expression, purification in E. coli with N-terminal His-tag, pRSETA available in Gerth lab
  • References

    Reviews

  • 22933559
  • Original publications

  • 16009133,17630974,22373918,16549871,14762004,11948146,22383849,22517742,23536821,23779106,25138221,26707201