alaR [2019-01-31 12:53:32]

transcriptional regulator (Lrp family) of the alaR-alaT operon

locus: BSU31410

pI: 4.89

mw: 18.62 kDa

protein length: 166 aa

gene length: 501 bp

function: unknown

product: transcription regulator (Lrp family)

essential: no

synonyms: yugG

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.5|Transcription factors/ other]
• [category|SW 6|Groups of genes] → [category|SW 6.4|Phosphoproteins] → [category|SW 6.4.1|Phosphorylation on an Arg residue]

Gene

Coordinates: 3,226,933 3,227,433

The protein

Protein family

• ([SW|Lrp family])

Modification

• phosphorylated on Arg-79 [Pubmed|22517742]

Expression and Regulation

Operons

• genes: [gene|1CA87275AFA1B4E4B5E8E10229009F785E70BBA8|alaR]-[gene|62A9CD9AF72D0A48EC5ABC1585E2D8636D36D021|alaT]
  description: [Pubmed|22383849]

  additional information

  • A [protein|search|ncRNA] is predicted between [gene|B0908BB4B8B569A7A78BB0B84784FD4C427C598B|yugI] and [gene|62A9CD9AF72D0A48EC5ABC1585E2D8636D36D021|alaT] [PubMed|20525796]

Biological materials

Mutant

• MGNA-A622 (yugG::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/622 NBRP B. subtilis, Japan]
• BKE31410 ([gene|1CA87275AFA1B4E4B5E8E10229009F785E70BBA8|alaR]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE31410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGATTCACACCTTTGC, downstream forward: _UP4_AAAAGAATCGTGGTGTCACC
• BKK31410 ([gene|1CA87275AFA1B4E4B5E8E10229009F785E70BBA8|alaR]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK31410 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTGATTCACACCTTTGC, downstream forward: _UP4_AAAAGAATCGTGGTGTCACC

References

• 22517742,22383849