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yydI [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]
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yydI [Tue Dec 13 2016 11:16:37 GMT+0100 (CET)]

ABC transporter (resistance), ATP-binding protein, export of YydF
locus
BSU40150
pI
8.39
mw
23.00 kDa
function
control of LiaR-LiaS activity
product
ABC transporter (resistance), ATP-binding protein
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.1|ABC transporters] → [category|SW 1.2.1.2|Exporters] → [category|SW 1.2.1.2.3|Export of peptides]
  • [category|SW 2|Metabolism] → [category|SW 2.6|Additional metabolic pathways] → [category|SW 2.6.6|Miscellaneous metabolic pathways] → [category|SW 2.6.6.1|Biosynthesis of antibacterial compounds]
  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.2|Control of two-component response regulators] → [category|SW 3.4.2.2.3|Control of response regulators/ other]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.15|Biosynthesis of antibacterial compounds]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • [SW|Categories] containing this gene/protein

  • [SW|ABC transporters], [SW|transcription factors and their control], [SW|membrane proteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|AbrB regulon], [SW|Rok regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    4,124,963 -> 4,125,592

    The protein

    [SW|Localization]

  • membrane associated (via [protein|search|YydJ]-[protein|search|YydH]) [Pubmed|10092453]
  • [SW|Interactions]

  • [protein|search|YydI]-([protein|search|YydJ]-[protein|search|YydH]) [Pubmed|10092453]
  • Expression and Regulation

    Operon

  • ''[protein|search|yydF]-[protein|search|yydG]-[protein|search|yydH]-[protein|search|yydI]-[protein|search|yydJ]'' [Pubmed|17921301]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|17921301]
  • Regulation

  • activated after transition to stationary phase([protein|search|AbrB]) [Pubmed|17921301]
  • repressed by [protein|search|Rok] [Pubmed|15743949]
  • Regulatory mechanism

  • [protein|search|AbrB]: transcription repression [Pubmed|17921301]
  • [protein|search|Rok]: transcription repression [Pubmed|15743949]
  • Additional information

  • the amount of the mRNA is substantially decreased upon depletion of [Rny|search|RNase Y] [PubMed|21815947]
  • References

    Reviews

  • 23106164
  • Original publications

  • 10092453,23199363,17921301,15743949,17921301,21815947