SubtiBank SubtiBank
yorS
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yorS

putative SPBc2 prophage-derived 5'(3')-deoxyribonucleotidase
locus
BSU_20270
pI
5.45
mw
20.27 kDa
protein length
172 aa Sequence Blast
gene length
519 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.8|Genetics/ other/ based on similarity]
  • [category|SW 5|Prophages and mobile genetic elements] → [category|SW 5.1|Prophages] → [category|SW 5.1.2|SP-beta prophage]
  • Gene

    Coordinates
    2,172,932 2,173,450

    The protein

    Protein family

  • 5'(3')-deoxyribonucleotidase family (with [protein|098F3D9EB9A30575E2393F7F335E4ADD8D028C2A|YqfW], according to UniProt)
  • Structure

  • [PDB|3BWV] (from Staphylococcus epidermidis, 40% identity)
  • Biological materials

    Mutant

  • BKE20270 ([gene|18F8A8EBABD9846966A8DEFD9D4E3F2404828E92|yorS]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE20270 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTACTTTTTTCATAAATT, downstream forward: _UP4_TAAAATATCTCATTTATCCA
  • BKK20270 ([gene|18F8A8EBABD9846966A8DEFD9D4E3F2404828E92|yorS]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK20270 BGSC], [Pubmed|28189581], upstream reverse: _UP1_AATTACTTTTTTCATAAATT, downstream forward: _UP4_TAAAATATCTCATTTATCCA