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gabP [Mon Aug 31 2015 13:52:52 GMT+0200 (CEST)]
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gabP [Mon Aug 31 2015 13:52:52 GMT+0200 (CEST)]

gamma-amino butyric acid permease and minor proline permease
locus
BSU06310
pI
9.45
mw
50.00 kDa
function
utilization of gamma-amino butyric acid
product
gamma-amino butyric acid permease
essential
no
synonyms
nrg-21

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.1|Amino acid transporters] → [category|SW 1.2.4.1.4|APC superfamily]
  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.4|Transporter for organic acids]
  • [category|SW 2|Metabolism] → [category|SW 2.3|Amino acid/ nitrogen metabolism] → [category|SW 2.3.2|Utilization of amino acids] → [category|SW 2.3.2.10|Utilization of gamma-amino butyric acid]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • syns
    nrg-21

    [SW|Categories] containing this gene/protein

  • [SW|transporters/ other], [SW|utilization of amino acids], [SW|membrane proteins]
  • This gene is a member of the following [SW|regulons]

  • [SW|CodY regulon], [SW|TnrA regulon]
  • Gene

    Phenotypes of a mutant

  • defective in the utilization of gamma-amino butyrate [Pubmed|24142252]
  • The protein

    Catalyzed reaction/ biological activity

  • uptake of gamma-amino butyrate [Pubmed|24142252]
  • minor transporter for proline (allows growth with proline in the absence of the major [SW|transporters] [protein|search|PutP] and [protein|search|OpuE]) [Pubmed|24142252]
  • Paralogous protein(s)

  • [protein|search|AapA], [protein|search|HutM], [protein|search|RocC], [protein|search|RocE], [protein|search|YbgF], [protein|search|YbxG], [protein|search|YdgF], [protein|search|YtnA], [protein|search|YvbW]
  • [SW|Localization]

  • cell membrane (according to Swiss-Prot)
  • Expression and Regulation

    Operon

  • ''gabP'' [Pubmed|8951816]
  • [SW|Sigma factor]

  • [protein|search|SigA] [Pubmed|8951816]
  • Regulation

  • expressed in the absence of good nitrogen sources (glutamine or ammonium) ([protein|search|TnrA]) [Pubmed|8951816]
  • repressed during growth in the presence of branched chain amino acids ([protein|search|CodY]) [Pubmed|8951816]
  • Regulatory mechanism

  • [protein|search|TnrA]: transcription activation [Pubmed|8951816]
  • [protein|search|CodY]: transcription repression [Pubmed|8951816]
  • Biological materials

    Mutant

  • available in [SW|Erhard Bremer]'s lab [Pubmed|24142252]
  • References

  • 8951816,9677314,24142252,25755103