yloM [Tue Dec 13 2016 11:16:33 GMT+0100 (CET)]

similar to RNA-binding Sun protein, similar to S-adenosyl-L-methionine-dependent 16S rRNA m5C967 methyltransferase

locus: BSU15740

pI: 6.00

mw: 50.00 kDa

function: rRNA modification

product: S-adenosyl-L-methionine-dependent 16S rRNA m5C967 methyltransferase

essential: no

synonyms: sun

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.3|rRNA modification and maturation/ based on similarity]

[SW|Categories] containing this gene/protein

• [SW|translation]

Gene

Coordinates on the chromosome (coding sequence): 1,647,939 -> 1,649,282

The protein

Catalyzed reaction/ biological activity

• S-adenosyl-L-methionine rRNA = S-adenosyl-L-homocysteine rRNA containing C(5)-methylcytosine (according to Swiss-Prot)

Protein family

• RsmB/NOP family (according to Swiss-Prot)

Structure

• [PDB|1SQF] (''E. coli'' Fmu protein, complex with SAM) [Pubmed|14656444]

[SW|Localization]

• cytoplasm (according to Swiss-Prot)

Expression and Regulation

Operon

• ''[protein|search|defA]-[protein|search|fmt]-[protein|search|yloM]'' [Pubmed|16964327]

[SW|Sigma factor]

• [protein|search|SigA] [Pubmed|16964327]

References

• 16964327,14656444