SubtiBank SubtiBank
yfiU
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yfiU

similar to multidrug-efflux transporter
locus
BSU_08400
pI
7.61
mw
54.77 kDa
protein length
518 aa Sequence Blast
gene length
1557 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms

Genomic Context

      

categories

  • [category|SW 1|Cellular processes] → [category|SW 1.2|Transporters] → [category|SW 1.2.4|Transporters/ other] → [category|SW 1.2.4.12|Other transporters]
  • [category|SW 4|Lifestyles] → [category|SW 4.3|Coping with stress] → [category|SW 4.3.14|Resistance against toxins/ antibiotics/ based on similarity]
  • [category|SW 6|Groups of genes] → [category|SW 6.2|Membrane proteins]
  • Gene

    Coordinates
    914,457 916,013

    The protein

    Protein family

  • [SW|major facilitator superfamily] (according to UniProt)
  • [SW|TCR/Tet family] (according to UniProt)
  • [SW|Localization]

  • cell membrane (according to UniProt)
  • Expression and Regulation

    Operons

    genes
    [gene|0FA2855B04F4977D55FF7BE59E34E4994D0C38F9|yfiU]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-C308 (yfiU::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/2306 NBRP B. subtilis, Japan]
  • BKE08400 ([gene|0FA2855B04F4977D55FF7BE59E34E4994D0C38F9|yfiU]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE08400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCGTCAACTCCTTTT, downstream forward: _UP4_CGTTAAGACCACCCCATCCG
  • BKK08400 ([gene|0FA2855B04F4977D55FF7BE59E34E4994D0C38F9|yfiU]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK08400 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATTTTCGTCAACTCCTTTT, downstream forward: _UP4_CGTTAAGACCACCCCATCCG