SubtiBank SubtiBank
ypoP
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ypoP

similar to transcriptional regulator ([SW|MarR family])
locus
BSU_21700
pI
9.26
mw
16.72 kDa
protein length
141 aa Sequence Blast
gene length
426 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    2,288,194 2,288,619

    The protein

    Protein family

  • [SW|MarR family]

    • [SW|Domains]

  • [SW|HTH marR-type domain] (aa 4-139) (according to UniProt)

    • Structure

  • [PDB|2RDP] (from Geobacillus stearothermophilus, 25% identity)

    • Expression and Regulation

    Operons

    genes
    [gene|0021EF5F0934B4D6A1A52C5B34B36D135E6D8CE8|ypoP]
    description
    [Pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A891 (ypoP::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/891 NBRP B. subtilis, Japan]
  • BKE21700 ([gene|0021EF5F0934B4D6A1A52C5B34B36D135E6D8CE8|ypoP]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE21700 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATTTGTGAACCTCCATT, downstream forward: _UP4_TGAAAAAAAGCACATACCGA
  • BKK21700 ([gene|0021EF5F0934B4D6A1A52C5B34B36D135E6D8CE8|ypoP]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK21700 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CAAATTTGTGAACCTCCATT, downstream forward: _UP4_TGAAAAAAAGCACATACCGA