SubtiBank SubtiBank
ynbB
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ynbB

putative C-S lyase, required for Efp modification
Locus
BSU_17440
Isoelectric point
5.09
Molecular weight
45.91 kDa
Protein length
421 aa Sequence Blast
Gene length
1266 bp Sequence Blast
Function
modification of Efp
Product
putative C-S lyase
Essential
no
Synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → Protein synthesis, modification and degradation → Translation → Translation factor modification and maturation
  • Information processing → Protein synthesis, modification and degradation → Protein modification → Protein modification/ other
  • Groups of genes → Poorly characterized/ putative enzymes

    • Gene

    Coordinates
    1,876,584 1,877,849

    Phenotypes of a mutant

  • inactivation suppresses the swarming defect of a ymfI mutant PubMed

    • The protein

    Cofactors

  • PLP (according to UniProt)

    • Structure

  • 3JZL (from Listeria monocytogenes str. 4b f2365, 67% identity, 80% similarity) PubMed, 3HT4 (from Bacillus Cereus, 99% indentity)

    • Expression and Regulation

    Operons

    Genes
    ynbA-ynbB-glnR-glnA
    Description
    PubMed

    Regulation

  • the mRNA is processed between glnR and glnA by RNase Y, this requires the YmcA-YlbF-YaaT complex PubMed
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    Biological materials

    Mutant

  • MGNA-B092 (ynbB::erm), available at the NBRP B. subtilis, Japan
  • BKE17440 (ynbB::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AAACATGTCTTTATATTTCC, downstream forward: _UP4_TAAATTTTTTAAAAATTTCT
  • BKK17440 (ynbB::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_AAACATGTCTTTATATTTCC, downstream forward: _UP4_TAAATTTTTTAAAAATTTCT

    • References

    Research papers

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