SubtiBank SubtiBank
ykpC
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ykpC

unknown
locus
BSU_14460
pI
12.19
mw
4.37 kDa
protein length
44 aa Sequence Blast
gene length
135 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 4|Lifestyles] → [category|SW 4.2|Sporulation] → [category|SW 4.2.1|Sporulation proteins] → [category|SW 4.2.1.5|Newly identified sporulation proteins (based on transcription profiling)]

    • Gene

    Coordinates
    1,516,339 1,516,473

    Expression and Regulation

    Operons

    genes
    [gene|40829C3632E9DCEB9E1C14A674B4B217F504CFE0|mreBH]-[gene|440E24C24D7B12175A839D7DC310339DF75BCB09|ykpC]
    description
    [Pubmed|27965289]

    sigma factors

  • [protein|3DEAC421B4B173C6BBC700E57790751B7AFDF319|SigI]: sigma factor, [Pubmed|18156261], in [regulon|3DEAC421B4B173C6BBC700E57790751B7AFDF319|SigI regulon]

    • regulatory mechanism

  • [protein|7F340423A34CE40D1F1AA8D373F7C4B859A6496D|WalR]: activation, [Pubmed|24125693], in [regulon|7F340423A34CE40D1F1AA8D373F7C4B859A6496D|WalR regulon]

    • regulation

  • expression is increased in an [gene|7A606B8E952AE8CA4F9A62008BA4B156725BB5B5|ugtP] mutant [Pubmed|22362028]
  • induced at high temperature ([protein|3DEAC421B4B173C6BBC700E57790751B7AFDF319|SigI], [protein|7F340423A34CE40D1F1AA8D373F7C4B859A6496D|WalR]) [Pubmed|24125693,18156261]
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    Biological materials

    Mutant

  • BKE14460 ([gene|440E24C24D7B12175A839D7DC310339DF75BCB09|ykpC]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE14460 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTGTTTCCTCCTTAACG, downstream forward: _UP4_TAATATTGAAAAAACCCAAG
  • BKK14460 ([gene|440E24C24D7B12175A839D7DC310339DF75BCB09|ykpC]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK14460 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTGTTTCCTCCTTAACG, downstream forward: _UP4_TAATATTGAAAAAACCCAAG

    • References

  • 24125693,18156261,22362028,27965289,29914988