SubtiBank SubtiBank
rnmV
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rnmV

RNase M5
Locus
BSU_00410
Isoelectric point
6.68
Molecular weight
20.53 kDa
Protein length
186 aa Sequence Blast
Gene length
561 bp Sequence Blast
Function
5S ribosomal RNA maturation
Product
endoribonuclease M5
Essential
no
Synonyms
yabF
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Information processing → RNA synthesis and degradation → RNases → Endoribonucleases
  • Information processing → Protein synthesis, modification and degradation → Translation → rRNA modification and maturation

    • Gene

    Coordinates
    50,087 50,647

    The protein

    Catalyzed reaction/ biological activity

  • Endonucleolytic cleavage of RNA, removing 21 and 42 nucleotides, respectively, from the 5'- and 3'-termini of a 5S-rRNA precursor (according to UniProt)

    • Protein family

  • Ribonuclease M5 family (single member, according to UniProt)

    • Domains

  • N-terminal TOPRIM domain (aa 4-94) PubMed

    • Localization

  • cytoplasm (homogeneous) PubMed

    • Expression and Regulation

    Operons

    Genes
    rnmV-ksgA
    Description
    PubMed
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    Biological materials

    Mutant

  • MGNA-B906 (yabF::erm), available at the NBRP B. subtilis, Japan
  • BKE00410 (rnmV::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTATTTCCTCCAAGACAA, downstream forward: _UP4_GATACCGTTATGCGGGAGGA
  • BKK00410 (rnmV::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTATTTCCTCCAAGACAA, downstream forward: _UP4_GATACCGTTATGCGGGAGGA

    • Labs working on this gene/protein

  • Ciaran Condon, IBPC, Paris, France Homepage

    • References

    Reviews

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    Original Publications

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