SubtiBank SubtiBank
yvaF
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yvaF

Uncharacterized HTH-type transcriptional regulator
locus
BSU_33580
pI
4.70
mw
21.85 kDa
protein length
190 aa Sequence Blast
gene length
573 bp Sequence Blast
function
unknown
product
unknown
essential
no
synonyms
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.4|Regulation of gene expression] → [category|SW 3.4.2|Transcription factors and their control] → [category|SW 3.4.2.6|Transcription factor/ other/ based on similarity]

    • Gene

    Coordinates
    3,449,049 3,449,621

    The protein

    [SW|Domains]

  • [SW|HTH tetR-type domain] (aa 1-58) (according to UniProt)

    • Expression and Regulation

    Operons

    genes
    [gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]-[gene|230D790937DAFB82A04B8597699115E1C1EAE98E|yvaE]-[gene|B7FBC30B744D8B1F26AFC5DCB297FAFAB5C60FB7|yvaD]
    description
    [pubmed|22383849]
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    Biological materials

    Mutant

  • MGNA-A446 (yvaF::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/446 NBRP B. subtilis, Japan]
  • BKE33580 ([gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE33580 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTAATCCCCCGCTTTC, downstream forward: _UP4_GCTGATGAGGAGGCTGATGC
  • BKK33580 ([gene|97CE9735931D02E6E780C955C9BE3A67E5C4C59A|yvaF]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK33580 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATTAATCCCCCGCTTTC, downstream forward: _UP4_GCTGATGAGGAGGCTGATGC