SubtiBank SubtiBank
Category: Transcription
An ordered knock out library of all non-essential genes in B. subtilis is now available at Addgene. Information on ordering a copy can be found here. See Koo et al. 2017 for details about library construction.

Category: Transcription

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3. Information processing

3.2. RNA synthesis and degradation

3.2.1. Transcription

3.2.1.1. RNA polymerase

NameFunction
rpoAtranscription
rpoB[SW|transcription]
rpoC[SW|transcription]
rpoEtranscription
rpoYcontrol of RNA polymerase activity
yloHunknown

3.2.1.2. Sigma factors

NameFunction
rsoARNA polymerase sigma factor
sigAtranscription
sigBgeneral stress response
sigDregulation of flagella, motility, chemotaxis and autolysis
sigEtranscription of [SW|sporulation ]genes (early mother cell)
sigFtranscription of sporulation genes (early forespore)
sigGtranscription of sporulation genes (late forespore)
sigHtranscription of early stationary phase genes (sporulation, competence)
sigIcontrol of a class of heat shock genes
sigKClate mother cell-specific gene expression
sigKNlate mother cell-specific gene expression
sigLutilization of arginin, acetoin and fructose, required for cold adaptation
sigMadaptation to inhibitors of peptidoglycan synthesis
sigORNA polymerase sigma factor
sigVresistance to lytic enzymes
sigWadaptation to membrane-active compounds
sigXresistance to cationic antimcrobial peptides
sigYmaintenance of the SPß prophage
sigZ[category|SW 3.2.1|Transcription]
xpftranscription of PBSX prophage genes
ylaC[category|SW 3.2.1|Transcription]

3.2.1.3. Transcription elongation/ termination

NameFunction
greAtranscription elongation
mfdpromotes strand-specific DNA repair by displacing
nusAtranscription
nusBunknown
nusGtranscription
rhotranscriptional termination

3.2.1.4. Prophage/ phage transcription

NameFunction
yonOtranscription of late SPβ genes

important publications

  • 21350489,22087258,22383849,24789973,28723971
  • reviews

  • 18599813,14527287,12455702,12213655,12073657,7708009,19489723,10329121,21478900,22210308,24237659,26132790,28657884,25002089