SubtiBank SubtiBank
Category: Transcription
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Category: Transcription

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3. Information processing

3.2. RNA synthesis and degradation

3.2.1. Transcription

3.2.1.1. RNA polymerase

NameFunction
rpoAtranscription
rpoB[SW|transcription]
rpoC[SW|transcription]
rpoE[SW|transcription]
rpoYcontrol of RNA polymerase activity
yloHunknown

Key publications

  • 29454936,29856930
  • 3.2.1.2. Sigma factors

    NameFunction
    rsoARNA polymerase sigma factor
    sigAtranscription
    sigBgeneral stress response
    sigDregulation of flagella, motility, chemotaxis and autolysis
    sigEtranscription of [SW|sporulation ]genes (early mother cell)
    sigFtranscription of [SW|sporulation] genes (early forespore)
    sigGtranscription of [SW|sporulation] genes (late forespore)
    sigHtranscription of early stationary phase genes ([SW|sporulation], competence)
    sigIcontrol of a class of heat shock genes
    sigKClate mother cell-specific gene expression
    sigKNlate mother cell-specific gene expression
    sigLutilization of arginin, acetoin and fructose, required for cold adaptation
    sigMadaptation to inhibitors of peptidoglycan synthesis
    sigORNA polymerase sigma factor
    sigVresistance to lytic enzymes
    sigWadaptation to membrane-active compounds
    sigXresistance to cationic antimcrobial peptides
    sigYmaintenance of the SPß prophage
    sigZ[category|SW 3.2.1|Transcription]
    xpftranscription of PBSX prophage genes
    ylaC[category|SW 3.2.1|Transcription]

    Key publications

  • 29343670,29454936
  • 3.2.1.3. Transcription elongation/ termination

    NameFunction
    greAtranscription elongation
    mfdpromotes strand-specific DNA repair by displacing
    nusAtranscription
    nusBstable RNA transcription
    nusGtranscription
    rhotranscriptional termination

    3.2.1.4. Prophage/ phage transcription

    NameFunction
    yonOtranscription of late SPβ genes

    important publications

  • 21350489,22087258,22383849,24789973,28723971
  • reviews

  • 18599813,14527287,12455702,12213655,12073657,7708009,19489723,10329121,21478900,22210308,24237659,26132790,28657884,25002089