SubtiBank SubtiBank
Category: Cell wall degradation/ turnover
An ordered knock out library of all non-essential genes in B. subtilis is now available at Addgene. Information on ordering a copy can be found here. See Koo et al. 2017 for details about library construction.

Category: Cell wall degradation/ turnover

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1. Cellular processes

1.1. Cell envelope and cell division

1.1.3. Cell wall degradation/ turnover

1.1.3.1. Autolysis

NameFunction
blyASPß-mediated lysis
cwlAminor autolysin
cwlHcell wall metabolism
cwlKcell wall turnover
cwlOcell wall synthesis, cell elongation
cwlPcell wall turnover
cwlQcell wall turnover
cwlScell separation
cwlTconjugative transfer of ICEBs1
iseAprotection against cell envelope stress
lytAautolysis
lytBautolysis
lytCmajor autolysin, cell separation, wall turnover
lytDmajor autolysin, cell separation
lytEmajor autolysin, cell elongation and separation
lytFcell separation
lytGcell wall turnover
lytScontrol of pyruvate utilization
lytTcontrol of pyruvate utilization
pbpEendopeptidase
xepAphage release
xlyAPBSX prophage-mediated lysis
xlyBPBSX prophage-mediated lysis
yocHcell wall turnover

1.1.3.2. Autolysis/ based on similarity

NameFunction
ykvTunknown
ytkCunknown

1.1.3.3. Utilization of cell wall components

NameFunction
amiErecycling of cell wall material
gamAglucosamine utilization
gamPglucosamine uptake and phosphorylation
gamRregulation of glucosamine utilization
murPN-acetyl muramic acid uptake and phosphorylation
murQcell wall turnover
murRprobably regulation of muramic acid utilization
nagAN-acetylglucosamine utilization
nagBN-acetylglucosamine utilization
nagZcell wall recycling
yqiIcell wall metabolism

1.1.3.4. Endopeptidases

NameFunction
cwlKcell wall turnover
cwlOcell wall synthesis, cell elongation
cwlScell separation
lytEmajor autolysin, cell elongation and separation
lytFcell separation
lytHendospore cortex maturation
yqgTcell wall metabolism

1.1.3.5. N-acetyl-β-D-glucosaminidases

NameFunction
lytDmajor autolysin, cell separation
lytGcell wall turnover

1.1.3.6. Cell wall degradation/ turnover/ Additional genes

NameFunction
yqiIcell wall metabolism

important Original Publications

  • 23600697, 23746506
  • important Reviews

  • 19019149,18792692,10708363,17468031,18266855,21796380,24035761,22944244