yyaE

yyaE
168

similar to formate dehydrogenase

locus
BSU_40930
Molecular weight
73.75 kDa
pI
5.16
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
yyaE

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0243 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
4,201,070 → 4,203,073
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The protein
Protein family
[wiki|prokaryotic molybdopterin-containing oxidoreductase family] (according to UniProt)
[wiki|Domains]
[wiki|4Fe-4S Mo/W bis-MGD-type domain] (aa 2-59) (according to UniProt)
[wiki|Cofactors]
Fe-S cluster [pubmed|29292548]
Structure
[PDB|2VPW] (from Thermus thermophilus, 26% identity) [pubmed|18536726]
[AF|P37519]
Paralogous protein(s)
[protein|628CCADB3C9A5F8A128C44ADE1DFDC2FC6B3CD01|yoaE]
Expression and Regulation
Operons
genes
[gene|BD162A17E5F3F9AB49E478CE72D0FE92D82E6673|yyzM]-[gene|FEE1952DFA3D6A5E2DC108B3B203B526642E2C68|yyaE]-[gene|C0F5FAD6DF89DA9E0FFC8F888D7CED6AA42D9C73|yyaF]-[gene|9D25B8F4579C41E77AE9CDD18CAD6DA37F3DD0A2|rpsF]-[gene|8DE39680CA7663803A107066FBE9AFFCC77DB72A|ssbA]-[gene|C0B926F1134A7A3FEEC886F9AF67F694C8E0C089|rpsR]
description
[Pubmed|22383849]
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[gene|BD162A17E5F3F9AB49E478CE72D0FE92D82E6673|yyzM]→[gene|C0B926F1134A7A3FEEC886F9AF67F694C8E0C089|rpsR]

2024-03-10 09:00:35

Jstuelk

88

9d6f6c8f552e3b902331ccb27a1c555fb109c0c2

9ABCA2D017C483FB4103C07C6AB9E7C773168C9B

Biological materials
Mutant
MGNA-B870 (yyaE::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1869 NBRP B. subtilis, Japan]
BKE40930 (Δ[gene|FEE1952DFA3D6A5E2DC108B3B203B526642E2C68|yyaE]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE40930 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCGCCGTCTTCTCCTTAC,  downstream forward: _UP4_TAATCAAAGGGATTGGCAAG
BKK40930 (Δ[gene|FEE1952DFA3D6A5E2DC108B3B203B526642E2C68|yyaE]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK40930 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCGCCGTCTTCTCCTTAC,  downstream forward: _UP4_TAATCAAAGGGATTGGCAAG
References
Research papers
18536726

FEE1952DFA3D6A5E2DC108B3B203B526642E2C68

Page visits: 1455

Time of last update: 2024-03-29 15:14:35

Author of last update: Melvin.boenninger