ywdK
168
unknown
locus
BSU_37930
Molecular weight
11.89 kDa
pI
9.43
function
unknown
product
unknown
essential
no
ec
null
synonyms
ywdK, ipa-61d
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG2363 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
3,894,030 3,894,401
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The protein
Protein family
UPF0382 family (single member, according to UniProt)
Structure
[AF|P39619]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|F267C75289D19D039F6E97F5DABCDFF0B4E4B8FA|ywdI]-[gene|BA4D8EF5B09345E94EEEEB936C803B71340DC5EE|ywdJ]-[gene|386D4F640E987E3752BEBE57BF25DF487D12EFCE|ywdK]
description
[Pubmed|12823818]
regulation
repressed in the absence of good nitrogen sources (glutamine or ammonium) ([protein|search|TnrA]) [Pubmed|12823818]
regulatory mechanism
[protein|857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|tnrA]: repression, [Pubmed|12823818], in [regulon|protein:857EF1AC54DEA0690C01B7F8CEFFD16312C58F20|tnrA regulon]
Biological materials
Mutant
MGNA-B237 (ywdK::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1236 NBRP B. subtilis, Japan]
BKE37930 ([gene|386D4F640E987E3752BEBE57BF25DF487D12EFCE|ywdK]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE37930 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTATCTCTCCCGCCTTT, downstream forward: _UP4_TAAACAAAAAAGCCAATCCT
BKK37930 ([gene|386D4F640E987E3752BEBE57BF25DF487D12EFCE|ywdK]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK37930 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATCTATCTCTCCCGCCTTT, downstream forward: _UP4_TAAACAAAAAAGCCAATCCT
References
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Time of last update: 2024-04-18 17:21:03
Author of last update: Melvin.boenninger