yvdR

yvdR
168

similar to multidrug-efflux transporter

locus
BSU_34500
Molecular weight
11.29 kDa
pI
9.06
Protein length
Gene length
function
unknown
product
subunit of unidentified multidrug transporter
essential
no
synonyms
yvdR

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2076 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,541,823  3,542,143
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The protein
Protein family
paired small multidrug resistance  protein family ([wiki|PSMR family]) [Pubmed|17942072]
[wiki|drug/metabolite transporter (DMT) superfamily] (according to UniProt)
[wiki|Small multidrug resistance (SMR) (TC 2.A.7.1) family] (according to UniProt)
Structure
[PDB|3B5D] (E. coli EmrE, 33% identity) [pubmed|18024586]
[AF|O06999]
[wiki|Localization]
cell membrane (according to UniProt)
Expression and Regulation
Operons
genes
[gene|8417C205E756C27D25BCEA9394DEB0968B5F4F7B|yvdT]-[gene|FDE9E1E86BA06B4CE782CBA32F113D302A0B2231|yvdS]-[gene|18CBED273AD7787971073117DFA0B89BDF149B25|yvdR]
description
[Pubmed|22383849]
Open in new tab

[gene|8417C205E756C27D25BCEA9394DEB0968B5F4F7B|yvdT]→[gene|18CBED273AD7787971073117DFA0B89BDF149B25|yvdR]

2024-03-14 12:07:16

Jstuelk

51

1b3e50dddbc6cea33557d614c43c379ad9551d6a

363164D2584B836A44C7C269AD6EB7DF366C5946

Biological materials
Mutant
MGNA-B618 (yvdR::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/1617 NBRP B. subtilis, Japan]
BKE34500 ([gene|18CBED273AD7787971073117DFA0B89BDF149B25|yvdR]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE34500 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTATTTTTCACCTCCCGG,  downstream forward: _UP4_TAAAATCAAGGCATATACAG
BKK34500 ([gene|18CBED273AD7787971073117DFA0B89BDF149B25|yvdR]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK34500 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTATTTTTCACCTCCCGG,  downstream forward: _UP4_TAAAATCAAGGCATATACAG
References
Research papers
22978536,18024586

18CBED273AD7787971073117DFA0B89BDF149B25

Page visits: 1589

Time of last update: 2024-03-28 00:54:18

Author of last update: Melvin.boenninger