yrpD

yrpD
168

unknown

locus
BSU_26820
Molecular weight
24.73 kDa
pI
9.96
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
yrpD

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms

This gene is a member of the following regulons

Gene
Coordinates
2,739,486 → 2,740,193
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The protein
Structure
[PDB|4HFS] (extracellular portion of [protein|258DD30EA27B6A2E81B8359E43203C37F588037A|yncM], 62% identity)
[AF|O05411]
Paralogous protein(s)
[protein|258DD30EA27B6A2E81B8359E43203C37F588037A|yncM]
[wiki|Localization]
extracellular (signal peptide) [Pubmed|18957862]
Expression and Regulation
Operons
genes
[gene|CB6300378FE7F14A9C7C664A533D73D513857FD7|yrpD]
description
[pubmed|22383849]
regulatory mechanism
[protein|E5110D9C36E8C55AFD1419987B14A53232165F20|abrB]: repression, [Pubmed|20817675], in [regulon|protein:E5110D9C36E8C55AFD1419987B14A53232165F20|abrB regulon]
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[gene|CB6300378FE7F14A9C7C664A533D73D513857FD7|yrpD]

2024-02-15 22:06:50

Bzhu

34

ff948bd9f739e09c00a6f660d336f7687aa87c99

F21E71F090FB75594694FF054AA9DD6DC1445414

Biological materials
Mutant
MGNA-A868 (yrpD::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/868 NBRP B. subtilis, Japan]
BKE26820 (Δ[gene|CB6300378FE7F14A9C7C664A533D73D513857FD7|yrpD]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE26820 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCATTATTTCCCCCTATC,  downstream forward: _UP4_TAAAACATGTTAAACATACA
BKK26820 (Δ[gene|CB6300378FE7F14A9C7C664A533D73D513857FD7|yrpD]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK26820 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATCATTATTTCCCCCTATC,  downstream forward: _UP4_TAAAACATGTTAAACATACA
References
18957862,20817675

CB6300378FE7F14A9C7C664A533D73D513857FD7

Page visits: 1529

Time of last update: 2024-03-27 16:14:54

Author of last update: Bzhu