yobL
168
LXG toxin, non-specific metal-dependent RNase
locus
BSU_19000
Molecular weight
67.59 kDa
pI
6.5
function
competetion with other bacteria in biofilms
product
LXG toxin, RNase
essential
no
ec
null
synonyms
yobL
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG5444 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
2,071,754 → 2,073,556
Phenotypes of a mutant
the mutant is outcompeted by wild type cells in biofilms [pubmed|34280190]
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The protein
[wiki|Domains]
[wiki|LXG domain] (aa 1-235) (according to UniProt)
Structure
[AF|O34330]
Expression and Regulation
Operons
genes
[gene|D24F5B473B9CFAD960D877A8BA593939012177E2|yobL]-[gene|E9FE0BA3CB7ABF98762F65B619ADC6BE0EC54B4E|yobK]
description
[pubmed|22383849]
Biological materials
Mutant
MGNA-A309 (yobL::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/309 NBRP B. subtilis, Japan]
BKE19000 (Δ[gene|D24F5B473B9CFAD960D877A8BA593939012177E2|yobL]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE19000 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCATTCTCCTTCCTAG, downstream forward: _UP4_TGAGGTGTTTATATGATTTA
BKK19000 (Δ[gene|D24F5B473B9CFAD960D877A8BA593939012177E2|yobL]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK19000 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CATATCATTCTCCTTCCTAG, downstream forward: _UP4_TGAGGTGTTTATATGATTTA
References
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Time of last update: 2024-04-19 17:25:53
Author of last update: Jstuelk