ykzQ
168
similar to potassium binding protein
locus
BSU_13789
Molecular weight
8.00 kDa
pI
9
function
unknown
product
unknown
essential
-
synonyms
ykzQ
Outlinks
Genomic Context
Categories containing this gene/protein
List of homologs in different organisms, belongs to COG1388 (Galperin et al., 2021)
This gene is a member of the following regulons
Gene
Coordinates
1,445,314 → 1,445,541
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The protein
[wiki|Domains]
contains a N-acetylglucosamine-polymer-binding [wiki|LysM domain] [Pubmed|18430080]
[wiki|LysM domain] (aa 29-72) (according to UniProt)
Structure
[PDB|5FIM] (from E. coli, 36% identity) [pubmed|27112601]
[AF|C0H403]
[wiki|Localization]
outer spore coat
Expression and Regulation
Operons
genes
[gene|FC4C5377EF1D794DCB19D0A8AFE958B84BD9C8BE|ykvP]-[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]-[gene|BC8CBFF0C2F3C2BEE3275E2CB65D41F2AFC0A1CD|ykvQ]
description
[Pubmed|11011148,22383849]
regulation
expressed late during sporulation in the mother cell ([protein|search|SigK]) [Pubmed|11011148,15699190]
sigma factors
[protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK]: sigma factor, [Pubmed|11011148,15699190], in [regulon|protein:24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK regulon]
genes
[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]
description
[pubmed|22383849]
regulatory mechanism
[protein|19228BAD44E6DA3DE908DC390FDF628C18D94E65|gerE]: activation, [Pubmed|26577401], in [regulon|protein:19228BAD44E6DA3DE908DC390FDF628C18D94E65|gerE regulon]
sigma factors
[protein|24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK]: sigma factor, [Pubmed|26577401], in [regulon|protein:24F7FD5C7C3A68BB2760ABB8CBD8FBD65E5FF7D4|sigK regulon]
Biological materials
Mutant
BKE13789 (Δ[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]::erm trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE13789 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CCCCTTCATTCATATTACTC, downstream forward: _UP4_TAATCTTTGAGGTTTCGGAA
BKK13789 (Δ[gene|E8311435A86835799E9093DD9CF3733CFFF18DCC|ykzQ]::kan trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK13789 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CCCCTTCATTCATATTACTC, downstream forward: _UP4_TAATCTTTGAGGTTTCGGAA
References
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Time of last update: 2024-04-17 20:11:23
Author of last update: Melvin.boenninger