ykfA

ykfA
168

similar to immunity to bacteriotoxins

locus
BSU_12970
Molecular weight
25.26 kDa
pI
5.41
Protein length
Gene length
function
unknown
product
unknown
essential
no
synonyms
ykfA

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1619 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,365,888 → 1,366,847
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The protein
Protein family
peptidase S66 family (with [protein|6B36C3B0FA04FBCB20C2C9AEA987DDD211E29629|yocD], according to UniProt)
Structure
[PDB|3SR3] (MccF from B. anthracis, 30% identity) [pubmed|22516613]
[AF|O34851]
Expression and Regulation
Operons
genes
[gene|9E922F0006DF9E84A8D5B51E9FC35B669872FF90|dppA]-[gene|062AE5FB4C778178A7F6833CB8BD9D631E461E89|dppB]-[gene|EDF8D2C49FA5552B24135E12524F9035E1E01473|dppC]-[gene|7FA72D949B930A3C7FF0391CC6CCC58EEFCA839A|dppD]-[gene|853C570CFB9382449A20BE77B44B4FE44972AA59|dppE]-[gene|C4F85F85F0C99A59145961E34B19D3AD03D2BC22|ykfA]-[gene|77EFC47449D8CC17651ED61C41AC605FCEF01270|ykfB]-[gene|D40ECAE51D9E4791C6FAAA25E2E0D0591D9FAA55|ykfC]-[gene|BB94F5388A0D1FF025E5A88A7E10AE7E4C489E5F|ykfD]
description
[pubmed|22383849]
regulatory mechanism
[protein|90ACE0DECA58D3C1A55E135120F7A0C1C920571C|codY]: repression, [Pubmed|12618455], in [regulon|protein:90ACE0DECA58D3C1A55E135120F7A0C1C920571C|codY regulon]
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[gene|9E922F0006DF9E84A8D5B51E9FC35B669872FF90|dppA]->[gene|BB94F5388A0D1FF025E5A88A7E10AE7E4C489E5F|ykfD]

2024-03-12 10:58:41

Bzhu

85

9978370314fc05087eca13c4f3ce94e92ce93ff2

E2A0CC9BE866DBD9F0E3A5F48EE05465C14EFD9D

Biological materials
Mutant
MGNA-A740 (ykfA::erm), available at the [https://shigen.nig.ac.jp/bsub/resource/strainGeneDisrupted/detail/740 NBRP B. subtilis, Japan]
BKE12970 (Δ[gene|C4F85F85F0C99A59145961E34B19D3AD03D2BC22|ykfA]::erm  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKE12970 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGCTCTGCACCCTACG,  downstream forward: _UP4_GTTTCAGAAGGGGCGCTGAA
BKK12970 (Δ[gene|C4F85F85F0C99A59145961E34B19D3AD03D2BC22|ykfA]::kan  trpC2) available at [http://bgsc.org/getdetail.php?bgscid=BKK12970 BGSC],  [Pubmed|28189581], upstream reverse: _UP1_CATTTGCTCTGCACCCTACG,  downstream forward: _UP4_GTTTCAGAAGGGGCGCTGAA
References
12618455,22516613

C4F85F85F0C99A59145961E34B19D3AD03D2BC22

Page visits: 1783

Time of last update: 2024-03-27 04:48:42

Author of last update: Melvin.boenninger